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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110640537, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMKRHLNTC YRLVWNHITG AFVVASELAR ARGKRGGVAV ALSLAAVTSL PVLAADIVVH  60
   61 PGETVNGGTL VNHDNQFVSG TADGVTVSTG LELGPDSDEN TGGQWIKAGG TGRNTTVTAN 120
  121 GRQIVQAGGT ASDTVIRDGG GQSLNGLAVN TTLDNRGEQW VHGGGKAAGT IINQDGYQTI 180
  181 KHGGLATGTI VNTGAEGGPE SENVSTGQMV GGTAESTTIN NNGRQVIWSS GVSRDTLIYT 240
  241 GGDQTVHGEA HNTRLEGGNQ YVHKYGLALN TVINEGGWQV VKAGGTAGNT TINQNGELKV 300
  301 HAGGEASDVT QNTGGALVTS TAATVTGTNR LGAFSVVEGK ADNVVLENGG RLDVLSGHTA 360
  361 TNTRVDDGGT LDVRNGGTAT TVSMGNGGVL LADSGAAVSG TRSDGTAFRI GGGQADALML 420
  421 EKGSSFTLNA GDTATDTTVN GGLFTARGGS LAGTTTLNNG AILTLSGKTV NNDTLTIREG 480
  481 DALLQGGSLT GNGSVEKSGS GTLTVSNTTL TQKAVNLNEG TLTLNDSTVT TDVIAQRGTA 540
  541 LKLTGSTVLN GAIDPTNVTL ASGATWNIPD NATVQSVVDD LSHAGQIHFT STRTGKFVPA 600
  601 TLKVKNLNGQ NGTISLRVRP DMAQNNADRL VIDGGRATGK TILNLVNAGN SASGLATSGK 660
  661 GIQVVEAING ATTEEGAFVQ GNRLQAGAFN YSLNRDSDES WYLRSENAYR AEVPLYASML 720
  721 TQAMDYDRIL AGSRSHQTGV NVKNNSVRLS IQGGHLGHDN NGGIARGATP ESSGSYGFVR 780
  781 LEGDLLRTEV AGMSVTAGVY GAAGHSSVDV KDDDGSRAGT VRDDAGSLGG YLNLTHTSSG 840
  841 LWADIVAQGT RHSMKASSDN NDFRARGWGW LGSLETGLPF SITDNLMLEP QLQYTWQGLS 900
  901 LDDGQDNAGY VKFGHGSAQH VRAGFRLGSH SDMTFGEGTS SRDTLRDSAK HSVRELPVNW 960
  961 WVQPSVIRTF SSRGDMSMGT AAAGSNMTFS PSQNGTSLDL QAGLEARVRE NITLGVQAGY1020
 1021 AHSVSGSSAE GYNGQATLNV TF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle