YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3228213
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKTPKKLTA LFHQKSTASC SGSNYSGSKC FRLHRLALLA CVALLDCIVA LPAYAADGKV  60
   61 TFQGEILSDG TCKIETDSQN LTVILPTVGK ANLRLVGQTA APVPFSIKLK DCNTGDAIKA 120
  121 NLLFSGGETR KPYLSNKADR GKATNVGIQI VKADGSETPI IVDGSQANSK KAPDTGKEQN 180
  181 GKVIQPRFDY FARYYAIGPA TAGNVEATAT FQVQYN

Type	Start	End	Confidence
Signal Peptide	1	55	0.99
N-region	1	46
H-region	47	52
C-region	53	55
Cleavage Site	55	56
Non-Cytoplasmic	56	216	0.99