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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13539232
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNFFIDRPI FAWVIAIIIM LAGGLSIMKL PVAQYPTIAP PAVTISATYP GADAKTVQDT  60
   61 VTQVIEQNMN GIDNLMYMSS NSDSTGTVQI TLTFQSGTDA DIAQVQVQNK LQLAMPLLPQ 120
  121 EVQQQGVSVE KSSSSFLMVV GVINTNGTMT QEDISDYVGA NMKDAISRTS GVGDVQLFGS 180
  181 QYAMRIWMDP TKLNNFQLTP VDVINAIKAQ NAQVAAGQLG GTPPVKGQQL NASIIAQTRL 240
  241 TSADEFSKIL LKVNQDGSQV RLRDVAKVEL GGENYDIIAK FNGQPASGLG IKLATGANAL 300
  301 DTANAIRAEL AKMEPYFPSG LKIVYPYDTT PFVKISIHEV VKTLVEAIIL VFLVMYLFLQ 360
  361 NFRATLIPTI AVPVVLLGTF AILAVFGFSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM 420
  421 AEEGLPPKEA TRKSMGQIQG ALVGIAMVLS AVFIPMAFFG GSTGAIYRQF SITIVSAMAL 480
  481 SVLVALILTP ALCATMLKPI QKGGHGEHKG FFGWFNRMFD KSTHHYTDSV GNILRSTGRY 540
  541 LVLYLIIVVG MAYLFVRLPS SFLPDEDQGV FLSMAQLPAG ASQERTQKVL DEMTDYYLTK 600
  601 EKNNVESVFA VNGFGFAGRG QNTGIAFVSL KDWSERPGSE NKVEAITGRA MARFSQIKDA 660
  661 MVFAFNLPAI VELGTATGFD FQLIDQGGLG HEKLTQARNQ LFGMVAQHPD LLVGVRPNGL 720
  721 EDTPQFKIDI DQEKAQALGV SISDINTTLG AAWGGSYVND FIDRGRVKKV YVMSEAKYRM 780
  781 LPEDIGNWYV RGSDGQMVPF SAFSTSHWEY GSPRLERYNG LPSMEILGQA APGRSTGEAM 840
  841 AMMEQLASKL PSGVGYDWTG MSYQERLSGN QAPALYAISL IVVFLCLAAL YESWSIPFSV 900
  901 MLVVPLGVVG ALLAATFRGL TNDVYFQVGL LTTIGLSAKN AILIVEFAKD LMEKEGKGLI 960
  961 EATLEAVRMR LRPILMTSLA FILGVMPLVI SSGAGSGAQN AVGTGVMGGM VTATVLAIFF1020
 1021 VPVFFVVVRR RFTKKTEDIE HNHPVEHH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle