YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2222675
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKGDSEPFE KIEQPKIGSP YNGSFLNRLP NLKNQRNKVL YRRLTFIISI LTIPLIFLIY  60
   61 YVSPYSRLQG ITVSGNQMIT SQTAIADSHL AIDGNVWSQY FHKNQYLDTL KKEQPRVESA 120
  121 QLHFKSINTF ELAIKEYKEI ALVMKDGEYF PVIENGKVLK EKVANPTKNL PILENFTDNA 180
  181 KISQLVKEYN QLTSELQKAI SEIKYTPKES NKNLIQLNMN DGNQVIVNIQ NLASQMKYYP 240
  241 QVAKEMKEKG VIDMEVGIFS YPYSESKKEN GGATDPSVQT SSTENLTGQS GASSDQSDQS 300
  301 SESVESNQAG QSENTSESSQ IDDNSSSSSS DLTEN

Type	Start	End	Confidence
Cytoplasmic	1	42	0.95
Transmembrane Helix	43	62	0.95
Non-Cytoplasmic	63	335	0.99