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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113649889, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKEGNLDA VLKEAVDLEN IPLEEVFENL RCSREGLTTQ QAQQRLEIFG PNKLEEKEES  60
   61 KFLKFLGFMW NPLSWVMEAA AIMAIALANG GGKPPDWQDF VGIITLLVIN STISFIEENN 120
  121 AGNAAAALMA RLAPKAKVLR DGRWTEEEAA ILVPGDIVSI KLGDIIPADA RLLEGDPLKI 180
  181 DQSALTGESL PVTKGPGDGV YSGSTVKQGE IEAIVIATGV HTFFGKAAHL VDSTNQVGHF 240
  241 QKVLTAIGNF CICSIAVGMF VEIIVMYPIQ HRAYRPGIDN LLVLLIGGIP IAMPTVLSVT 300
  301 MAIGSHRLSQ QGAITKRMTA IEEMAGMDVL CSDKTGTLTL NKLTVDKNLI DVFERGITQD 360
  361 QVILMAARAS RTENQDAIDT AIVGMLADPK EARAGIQEVH FLPFNPTDKR TALTYIDGDG 420
  421 KMYRVSKGAP EQILHLAHNK PEIERRVHAV IDKFAERGLR SLAVAYQEVP EGTKESPGGP 480
  481 WHFVGLMPLF DPPRHDSAET IRRALNLGVN VKMITGDQLA IGKETGRRLG MGTNMYPSSA 540
  541 LLGQNKDESI AALPVDDLIE KADGFAGVFP EHKYEIVKRL QARKHICGMT GDGVNDAPAL 600
  601 KKADIGIAVA DATDAARSAS DIVLTEPGLS VIISAVLTSR AIFQRMKNYT IYAVSITIRI 660
  661 VLGFMLLALI WKFDFPPFMV LIIAILNDGT IMTISKDRVK PSPLPDSWKL AEIFTTGVVL 720
  721 GGYLAMMTVI FFWAAYKTDF FPRIFHVESL EKTAQDDFQK LASAVYLQVS TISQALIFVT 780
  781 RSRSWSFVER PGFLLVFAFL VAQLIATLIA VYADWAFTSI KGIGWGWAGI VWLYNLIFYF 840
  841 PLDIIKFLIR YALSGKAWDL VIEQRIAFTR KKDFGKEERE LKWAHAQRTL HGLQPPDAKM 900
  901 FSEKAGYNEL NQMAEEAKRR AEIARLRELH TLKGHVESVV KLKGLDIETI QQSYTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle