YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2511693, gi\|7...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLFALFALS SALDMSIISY DNAHQDKATW RTDEEVNSLY EEWLVKHGKL YNALGEKDKR  60
   61 FQIFKDNLRF IDQQNAENRT YKLGLNRFAD LTNEEYRARY LGTKIDPNRR LGRTPSNRYA 120
  121 PRVGETLPDS VDWRKEGAVV PVKDQASCGS CWAFSAIGAV EGINKIVTGD LISLSEQELV 180
  181 DCDTGYNMGC NGGLMDYAFE FIIKNGGIDS EEDYPYKGVD GRCDEYRKNA KVVSIDGYED 240
  241 VNTYDELALK KAVANQPVSV AVEGGGREFQ LYSSGVFTGR CGTALDHGVV AVGYGTDNGH 300
  301 DFWIVRNSWG ADWGEEGYIR LERNLGNSRS GKCGIAIEPS YPIKTGQNPP NPGPSPPSPV 360
  361 KPPNVCDNYY SCSDSATCCC IFEFGKTCFE WGCCPLEGAT CCDDHYSCCP HDYPICNTYA 420
  421 GTCLRSKNNP FGVKALRRTP AKPHGAFAGN KVSNA

Type	Start	End	Confidence
Signal Peptide	1	19	0.85
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	455	0.99