YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4883425
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSLYARTHK FSLASPLFLL GLFTINLIPT ADAQIGICYG MMGNNLPPAN EVIDLYKANN  60
   61 IKRMRLYDPN QAALQALRNS GIELILGVPN SDLQSLATNN DIAIQWVQKN VLNFYPSVKI 120
  121 KYIAVGNEVS PIGGSSWLAQ YVLPATQNIY QAIRAKNLHD QIKVSTSIDM TLIGNSFPPS 180
  181 KGSFRSDVRS YLDPFIGYLV YAGAPLLVNV YPYFSYVGNP RDISLPYALF TSPNVMVQDG 240
  241 QYGYQNLFDA MLDSVHAALD NTGIGWVNVV VSESGWPSDG GSATSYDNAR IYLDNLIRHV 300
  301 GKGTPRRPWA TETYIFAMFD ENQKSPELEK HFGVFNPNKQ KKYPFGFGGE RRNGEIVNDD 360
  361 FNATTVSLKS DM

Type	Start	End	Confidence
Signal Peptide	1	33	0.99
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	372	0.99