YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46408921
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLSAALALTE TRAGSHSLRY FSAGTSRPGR GEPRFMSVGY VDDTQFLRFD SDAASPRMEP  60
   61 RAPWAEQEGL EYWEEQTGLA KDFTQSFRVG LGNLRGYYNQ SEAGSHTLQW MYGCDLGPDG 120
  121 RLLRGYHQFA YDGKDYIALN GDLRSWTAAD TAAQITQRKW EVAREAEQVR AHLEGTCVEW 180
  181 LRRHLENGKE TLQSADPPKT HVTHHPVSDH EATLRCWALG FYPAEITLTW QRDGEEQTQD 240
  241 TELVETRPVG DGTFQKWAAV VVPSGEEQRY TCHVQHEGLP EPLTLRWEPS SQSTIPIVGI 300
  301 VAGLAVLAVV VTGAVVAAVM WRRKSSGGKG GSYSQAA

Type	Start	End	Confidence
Non-Cytoplasmic	1	296	0.98
Transmembrane Helix	297	319	0.95
Cytoplasmic	320	337	0.93