YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46408863
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLSGALALTQ TWAGSHSLRY FSTAVSRPGR REPWYFEVGY VDDTQFVRFD SDAESPRMEP  60
   61 RAPWMEQEGP EYWEEATRRA KGNAQTHRGN LRTALRYYNQ SEGGSHTLQW MYGCDLGPDG 120
  121 RLLRGYEQFA YDGKDYIALN EDLRSWTAAD MAARFTQRKW EAARAAEQLR AYLEGKCLEW 180
  181 LRRYLENQNE SLLRADPPKT HVTHHPVSDH EATLRCWALG FYPAEITLTW QRDGEDQTQD 240
  241 TELVETRPGG DGTFQKWAAV VVPSGEEQRY TCHVQHEGLP EPLTLRWEPS SQSTIPIVGI 300
  301 VAGLAVLAVV VTGAVVTVVM WRRKSSGGKG GSYFQAASND SAQGSDESLT A

Type	Start	End	Confidence
Non-Cytoplasmic	1	296	0.98
Transmembrane Helix	297	319	0.95
Cytoplasmic	320	351	0.96