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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8920427, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPARRVPPA AMIGRNGFAF GSSSALSLSQ ADLLDSHQLQ QAFQQQLFDQ IPTTTTVDDS  60
   61 SDNLIHGRSD TLVDEFESKS CSENPDGTSG DDGLEEDPNQ RPNKKKRYHR HTQHQIQEME 120
  121 AFFKECPHPD DKQRKELSRE LGLEPLQVKF WFQNKRTQMK NQHERHENAQ LRAENDKLRA 180
  181 ENMRYKEALG TASCPSCGGP AALGEMSFDE HHLRLENARL RDEIDRISGI AAKHVGKPMV 240
  241 SFPVLSSPLA AAAAAAARSP LDLAGAYGVQ SAAAGLGADH LFGAGAGDLL RSVSAGQLDA 300
  301 DKPMIVELAV AAMDELLRMA RPDALLWGGG ASAGAQQQLD EEEYVRTFPA GLGPRQYGLR 360
  361 PEASRDSAVV IMTCDSLIEI LMDANRFAAV FSSIVSRAST HEVLSTGVAG SYNGALQVMS 420
  421 MEFQVPSPLV PTRESYFVRY CKNNPDGTWA VVDVSLDSLR PSPVIKCRRR PSGCLIQEMP 480
  481 NGYSKVTWVE HVEVDDRSVH NLYRPLVNSG LAFGAKRWVG TLDRQCERLA SAMASNIPNG 540
  541 DLGVITSIEG RKSMLKLAER MVASFCGGVT ASAAHQWTTL SGSGAEDVRV MTRKSVDDPG 600
  601 RPPGIVLNAA TSFWLPVPPK RVFDFLRDET SRSEWDILSN GGAVQEMAHI ANGRDHGNCV 660
  661 SLLRVNSANS NQSNMLILQE SCTDASGSYV VYAPVDVVAM NVVLNGGDPD YVALLPSGFA 720
  721 ILPDGPPPAG AAPSHGEGLD AGGGGSLLTV AFQILVDSVP TGKLSLGSVA TVNSLIACTV 780
  781 ERIKAAVCAE AGNPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle