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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13897310, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASASAGRW WAVVLAVAVL LGPGQVVANT EGDALYSLRQ SLKDANNVLQ SWDPTLVNPC  60
   61 TWFHVTCNND NSVIRVDLGN AQLSGVLVPQ LGQLKNLQYL ELYSNNISGT IPPELGNLTN 120
  121 LVSLDLYMNN FSGNIPDSLG NLVKLRFLRL NNNSLVGPIP VSLTNISTLQ VLDLSNNNLS 180
  181 GQVPSTGSFS LFTPISFANN PNLCGPGTSK PCPGAPPFSP PPPFNPPSPP TQSTGASSTG 240
  241 AIAGGVAAGA ALVFAVPAIA FAMWRRRKPE EHFFDVPAEE DPEVHLGQLK KFSLRELQVA 300
  301 TDNFSNKNIL GRGGFGKVYK GRLADGSLVA VKRLKEERTP GGELQFQTEV EMISMAVHKN 360
  361 LLRLRGFCMT PTERLLVYPY MANGSVASRL RERQPSEPPL SWEPRRRIAL GSARGLSYLH 420
  421 DHCDPKIIHR DVKAANILLD EDFEAVVGDF GLAKLMDYKD THVTTAVRGT IGHIAPEYLS 480
  481 TGKSSEKTDV FGYGIMLLEL ITGQRAFDLA RLANDDDVML LDWVKGLLKE KKVEMLVDPD 540
  541 LQKAYEEVEV ESLIQVALLC TQGSPLDRPK MSEVVRMLEG DGLAERWDEW QKVEVVRQEA 600
  601 ESAPLRNDWI VDSTYNLRAV ELSGPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle