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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5689613
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGRDPWGGP LEIHATDSAT DDDRSRNLND IDRAALSRPL DETQQSWLLG PTEQKKKKYV  60
   61 DLGCIIVSRK IFVWTVGTIV AAALLAGFIT LIVKTVPRHH RKTPPPDNYT IALHKALKFF 120
  121 NAQKSGKLPR HNNVSWRGNS GLQDGKGDSG SFYKDLVGGY YDAGDAIKFN FPMAYAMTML 180
  181 SWSVIEYSAK YEAAGELVHV KELIKWGTDY FLKTFNSTAD SIDDLVSQVG SGNTDDGSTD 240
  241 PNDHYCWMRP EDMDYKRPVT TCNGGCSDLA AEMAAALASA SIVFKDNREY SKKLVHGAKT 300
  301 VYQFGRTRRG RYSAGTAESA KFYNSSMYWD EFIWGGAWLY YATGNVTYLD LITKPTMAKH 360
  361 AGAFWGGPYY GVFSWDNKLA GAQLLLSRLR LFLSPGYPYE EIVRTFHNQT SIVMCSYLPY 420
  421 FNKFNRTRGG LIELNHGDPQ PLQYAANAAF LATLYSDYLD AADTPGWYCG PNFYSTNVLR 480
  481 EFARTQIDYI LGKNPRKMSY LVGFGTKYPK HVHHRGASIP KNKVKYNCKG GWKWRDSKKP 540
  541 NPNTIEGAMV AGPDKRDGFR DVRTNYNYTE PTLAGNAGLV AALVALSGEE EASGTIDKNT 600
  601 IFSAVPPLFP TPPPPPAPWK P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle