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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21105742
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSSTSKEI KVIDENSVFP PGFRFHPTDE ELVLYYLKRK ICRRRILLDA IAETDVYKWD  60
   61 PEDLPDLSKL KTGDRQWFSF SPRDRKYPNG ARSNRATKHG YWKATGKDRT IMCNSRAVGV 120
  121 KKTLVFYKGR APVGERTDWV MHEYTMDEDE LKRCENAQDY YALYKVFKKS GPGPKNGEQY 180
  181 GAPFREEDWA DDDCPSGEVS VHQENSTQHV SEAPATDNAL EELMNHVADD PVRFEPFSVD 240
  241 YDYILEQIVQ EEDNESTLLD QSLREVNVHS HSAVVDPSCL QYNAKASFDL TQSGTSQLQL 300
  301 HEAPEVCSAP VNSEKPLRTV EEDFLEDFLE MDDLLGPEPS GGKLDHPGDC IQNFDNQSSS 360
  361 GQIFDKPAGN LETLQFDDFD GLGEFDLYHD APLLLNDAGT AMVGQNGESY MNNFVNEIAD 420
  421 PVSTTYMSTF QNDMMSNQQI HWNHENHINN QLWRHDERFN VFNPIEGNQF VVSQATSGVV 480
  481 YDSNMENHPM GANQNPIAKK DDGTQSWFSS NLWAFVDSIP TTPASAAESA LVNRAFERMS 540
  541 SFSRVKLNAR NMNVATGNTS ATSSSSGKPR NGFFCFSLLG VLCAILWVLI GTYANIMGRY 600
  601 ISS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle