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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18076583
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIQKWLLFL FLHLHVLNIV AQLPDLRFGI CGKSGNYTEN STYKNDLNTL LTSLSSKIDK  60
   61 YGFYNASIGQ NSDRASVIVL CRGDVELDDC RGCVDNVVQK IAQLCPNQKE VFGGYDGCML 120
  121 QYSNQSIIDT PSLSVQLFLW NTANASKPEE FNQELGKLLE NLRDRAAQGG PLQKYATGTT 180
  181 IGPDIQPIYA LVQCTPDLSR QSCFDCLTDA YGTLPQCPCL GKTGGRIIGI RCNFRYEISR 240
  241 FFVDVPLEAP PPAGNDNKTV PTGTENKTPP TGKDDKTTRT IIIIVVSTVT IVILMICIAV 300
  301 ILIRRRKRKL VNGIQGTSVD DTSIAESFQY DFSAIRAATD DFSDANKLGE GGFGPVYKGK 360
  361 LQNGQEVAVK RLSADSGQGD LESKNEVLLV ARLQHRNLVR LLGFCLDGTE RLLVYEFVPN 420
  421 ASLDHFLFDS VKRRQLDWER RSKIIGGIAK GILYLHEDSR LRIIHRDLKA SNVLLDAEMN 480
  481 PKISDFGMAR LFELDETQGS TNRIVGTYGY MAPEYAMHGQ FSVKSDVFSF GVLVLEILSG 540
  541 QKNTCFRNGE SVEDLLSFAW LSWRNGTTID FVDPMLKEST GLIRDIMRNI HIALLCVQES 600
  601 VADRPTMAAV VLMLSSFSLS LPMPSGPAFY MHSNITAETS LIKEYNTRMT DSSELAKSKS 660
  661 IGSSRNEASI SELYPR

YRC Informatics Platform - Version 3.0
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