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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12054894
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSISSDQAC TIPKLYANFF LGSDIEFVRP DGRPEFFNAD RFLSYYHSMT FAVNQEGQAL  60
   61 LPGRKLLAME LHEPFFESWD PRHENPCKWT GVICSLDHEN LVTEINIQSV QIAGNVPSQF 120
  121 AVLGSLRSLV ISAANLTGSI PAEIGGYESL EILDLSGNRL RGNIPAEISK LKNLKSLILN 180
  181 SNQLQGSIPA EIGNCHNLVD LVVFDNQLSG KIPAELGRLA NLEVFRAGGN ENIEGTLPDE 240
  241 LSNCTNLVTL GLAETNISGK IPLSFGSLKK LQTLAIYTAF LSGTIPAELG NCSELVNLYL 300
  301 YENRLSGAIP RELGKLQKLE KLYLWDNELD GSIPAELGSC SSLKFVDLST NSLSGSIPDS 360
  361 FGSLKNLSEL EITDNNVSGS IPAALANCTE LTQIQLYNNQ ISGQMPAELG ALKKLTVLFL 420
  421 WQNNLEGPIP SSLGSCDNLQ SLDLSHNRLT GSIPPSLFEI KNLTKLLLLS NELTGALPPE 480
  481 IGNCVALSRL RLGNNRLLNQ IPREIGKLEN LVFLDLAMNQ FSGSIPAEIG GCSQLQMLDL 540
  541 HGNRLGGELP RALGFLHGLQ VVDLSANELT GLIPANLGNL VALTKLTLNG NALSGAIPWE 600
  601 ISRCTNLQLL DLSLNRFSGQ IPPEMGKCKR LEIALNLSWN NLSGSIPAQF SGLTKLASLD 660
  661 LSHNLLSGNL SALAQLSESC FSQHFFQRFF RVSARYQVFS DLCLPSDLSG NAALCTSEEV 720
  721 CFMSSGAHFE QRVFEVKLVM ILLFSVTAVM MILGIWLVTQ SGEWVTGKWR IPRSGGHGRL 780
  781 TTFQKLNFSA DDVVNALVDS NIIGKGCSGV VYKAEMGNGD VIAVKKLWTG KESECEKVRE 840
  841 RDSFSAEVNT LGAIRHRNIV RLLGCCTNGR SKLLMYDYMP NGSLGGLLHE KRSMLDWEIR 900
  901 YNIVLGVRRG LSYLHHDCRP PILHRDVKAN NILLGSQYEP YLADFGLAKL VDSADFNRSS 960
  961 TTVAGSYGYI APEYGYTMKI TQKIDVYSFG VVLLEVVTGK QPIDPTIPEG VHLVEWARDA1020
 1021 VQSNKLADSA EVIDPRLQGR PDTQIQEMLQ VLGVAFLCVN SNPDERPTMK DVAALLKEIR1080
 1081 HDCHDYNGKA DLLLKQTPAP GSTRSPNPTA DARSPVGSSF GLEYSSASTT AHESYSLHSS1140
 1141 VSNVI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle