YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PNSL4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISTLTLTQ SLYTRSFRPT IFFSSSSSSS FSCLCSSSSD CEPKLSVKKR VFGVGLGFLA  60
   61 SSILSLTPLD ADATRIDYYA TVGDPLCEYS YAKSGLGFCD LDVGFGDEAP RGVLVNIHYT 120
  121 ARFADGTLFD SSYKRARPLT MRIGVGKVIR GLDQGILGGE GVPPMRVGGK RKLQIPPKLA 180
  181 YGPEPAGCFS GDCNIPGNAT LLYDINFVEI YPGSNTR

Type	Start	End	Confidence
Signal Peptide	1	39	0.91
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	217	0.99