YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21064663
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYALSSSLIR SPALRQGLQM AAASRQVSMK VVSVAETQKD ESFFEKNERL GRELSPHLTI  60
   61 YQPQLTSMLS ICHRGTGLAL GVGVWGLGLG ALISSHDISH YVTMVEGLQL SGATLTALKF 120
  121 IIAYPAGYHT ANGIRHLLWD TGRFLKIKEV YSTGYAMVAT SFVLSAILAL L

Type	Start	End	Confidence
Cytoplasmic	1	74	0.97
Transmembrane Helix	75	94	0.92
Non-Cytoplasmic	95	109	0.79
Transmembrane Helix	110	131	0.82
Cytoplasmic	132	149	0.85
Transmembrane Helix	150	170	0.92
Non-Cytoplasmic	171	171	0.96