YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21064655
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGKVLRLAL VLLLLASWTN EGRAQTESYE NPKALKVWLT ISARKRFLEV SWSNAPANKG  60
   61 DQLLVTREDA LSFQSQLLRK HTPLAGFPSE EGSGSGDGSP SYVPNSGFTA RPATKAASKE 120
  121 EEQEQYWVAN GGATEVVAAI EPRQGLSTQW FTTGLPFDYA LSRNATVQTA CYGFWASYID 180
  181 AQGNILAKTC LKVFPRWMND LKSKIGEMRL TDLFIPGTHD SGSYRPNFDP LLRESLVTKY 240
  241 ALTQETTSGD S

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	251	0.99