YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21064559
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGHVNHLLL HGCLLCLLGD VPRIEAFHRW SPMMKAFRYL QETMLRNSLE RAHLNHGIVF  60
   61 ECRTISAKDF GNEVHFNLQL GDLRGFRRLD PNKKLALFLH GWNDQGSKDW VQGLLLTWTL 120
  121 FDSNYNVCVV DWGNLSQNDY KSASMSIFDV GLTVAGIIMA LEELRPNHFH RSNVTLAGYS 180
  181 LGAHAAGYAG AVLEGQVEQI IGLDPAGPLF SLPAEVAPKY RLDPGDAQFV QVLHTSGGSL 240
  241 GTSLKCGHAD FYPNGGRAPQ TNCKMFANLR DMQNTNPVSC SHSAAAIFFR QSMDPEYPFV 300
  301 GYECGSYREF AAGYCDGNRK ARFGIHSQRR AQGSFYFRTA PQQPYVPRRQ TNWLSGVGRM 360
  361 SSSKVSQVSQ SPLVLRLWTN SWRRRERARE RQRRDRDRES DRCA

Type	Start	End	Confidence
Signal Peptide	1	26	0.81
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	404	0.96