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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21064229
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPFSSKRVE GVGNSTVALL VRHRPGQAYI TPNKPVVHVG NGVTLTCSAN PPGWPVPQYR  60
   61 WFRDMDGDIG NTQKILAQGP QYSIPKAHLG SEGKYHCHAV NELGIGKIAT IILEVHQPPQ 120
  121 FLAKLQQHMT RRVGDVDYAV TCSAKGKPTP QIRWIKDGTE ILPTRKMFDI RTTPTDAGGG 180
  181 VVAVQSILRF RGKARPNGNQ LLPNDRGLYT CLYENDVNSA NSSMHLRIEH EPIVIHQYNK 240
  241 VAYDLRESAE VVCRVQAYPK PEFQWQYGNN PSPLTMSSDG HYEISTRMEN NDVYTSILRI 300
  301 AHLQHSDYGE YICRAVNPLD SIRAPIRLQP KGSPEKPTNL KILEVGHNYA VLNWTPGFNG 360
  361 GFMSTKYLVS YRRVATPREQ TLSDCSGNGY IPSYQISSSS SNSNHEWIEF NCFKENPCKL 420
  421 APLDQHQSYM FKVYALNSKG TSGYSNEILA TTKVSKIPPP LHVSYDPNSH VLGINVAATC 480
  481 LSLIAVVESL VTRDATVPMW EIVETLTLLP SGSETTFKEA IINHVSRPAH YTTATTSGRS 540
  541 LGVGGGSHLG EDRTMALAET AGPGPVVRVK LCLRSNHEHC GAYANAEIGK SYMPHKSSMT 600
  601 TSALVAIIIA SLSFVVFLGL LYAFCHCRRK HAAKKESSSV GGGVGGGNAN ATANPGSTGA 660
  661 KEYDLDLDAS RRPSLSQDPQ QSQQQPPPPP PYYPTGTLDS KDIGNGNGGM ELTLTALHDP 720
  721 DEQLNMQQQQ HHSNHGQYQQ PKAILGIYGG VAGSGGNNSG GQHPHSNGYG YHVTSAIGVD 780
  781 SDSYQVLPSV ANSAAGSHGH GSGHGHGLGA GE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle