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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21064093
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEFTKELV IDAVNMLSSG NISLANEYLA AFQKSNDTWI IAEEILSYRP PHDMHILTFA  60
   61 AMSLAKKIKT SFYSLQKFQL MSLKNSLIDH LKYAAMMRNS NSLIVQLAVG ISALGLMFSQ 120
  121 WDYELQDFVR KLSENPQYVM ALLEVLKVIP EETRPSNLPV EAKKLNSVID TLEQQSPYIL 180
  181 DVLEGLLQRP DLPDDALPKC LAVCASWTKF SMLSPDQVLQ RKLFIMAEFI LATPLVNGHL 240
  241 EAAELFVALL EQSLIRKELN SCLANSVISL KPAFKRSMGE RSLLQNYCNI FVNLFQTHFR 300
  301 LTQTNPERLN ERLVTIELLL LVAEESPLEV IEASLGMWSS ISEEVYLHDD PQMYSVYQPY 360
  361 FVRLLDLLLP RAALPASYEF MMPPGSADMQ RFRELISEVL LDMAHMIDDD TVEKLCSIVV 420
  421 DEQSPWMEVE ASVFFLRHLI GNFKEHQTDI ISCILKTFFQ KDCQQPFIRL QVLELISTPE 480
  481 TVSVETIWDC LVNELRRADP MLSAIDCRLN LLMPHWNYLV TLAIMVDEFC LKESERCELL 540
  541 CSICTLIREL PAACVQEAKT SILNIRWIKC PAHIEENRHR VLMNSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle