YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21064025
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVALSRTSKL TVACVGVYTT YVLFIFFLLP MLMPDPVTLQ RSLVSYSTSH LGDIRNLTLD  60
   61 AGGQPIRSML VTFRGSGALT LLDNLAHQPG CYQHYAPLIA YESRSIAAKE HHRALDELAA 120
  121 LYNCDYNKSA EMIQWGMRSP VFRRFYGAQA KICRSYSQEA CWDPETMAAV CKLYPFINMA 180
  181 VYNLRLNLLA SLLERKDLNL NIMLLVRDPR GTIYSRMNNK WCSDERDCEA EALCGDMVSD 240
  241 YQMVETLTQA YPQRFSIIRY EDLFLQPDES IKQVFDFYGL PLERNRSRIQ KMHPRSGYFV 300
  301 QSSRWKELSS QSAFEWISEM MVDDIGAVQD VCGQAMDLWG YRSIQDFNHF SPESFQPIMD 360
  361 KAY

Type	Start	End	Confidence
Cytoplasmic	1	9	0.95
Transmembrane Helix	10	33	0.89
Non-Cytoplasmic	34	363	0.99