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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25407629, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRKDKLLM FYSEGKESKE AKWAVNDPMS KSYKLSLPSA LRPDNLLPGN RLRYTDASKS  60
   61 KSSKVSWYKT ILDPGSEIVL KWNWVFIVSC MVALFIDPLY FFVPAIGGDK NYPCARTDTS 120
  121 LSILVTFFRT IADLFYLLHI FIKFRTGFIA PNSSTRVFGR GELVMDPKAI AWRYIKSDFI 180
  181 IDLIATLPLP QIVIWFVIST TKSYRFDHNN NAIALIVLLQ YIPRFYLIIP LSSQIVKATG 240
  241 VVTKTAWAGA AYNLLLYMLA SHMFLLGQVL GAAWYILSVD RYTSCWKSRC NGEAGQVNCQ 300
  301 LYYLDCDSMY DNNQMTWANV TKVFKLCDAR NGEFKYGIFG NAITKNVVSS QFFERYFYCL 360
  361 WWGLQQLSSY GQNLSTTMFM GETTFAVLIA IFGLVLFAHL IGNMQTYLQS LTVRLEEWRL 420
  421 KKRDTEEWMR HRQLPEELRN RVRRYEQYKW LATRGVDEEV LLQSLPTDLR RDIQRHLCLD 480
  481 LVRRVPFFSQ MDDQLLDAIC ERLVSSLCTE GTYLVREGDL ISEMLFIIRG RLESSTTNGG 540
  541 RTGFFNSIIL RPGDFCGEEL LSWALLPKST LNLPSSTRTV RALVEVEAFA LRAEDLKFVA 600
  601 NQFRRLHSKK LQHTFRFYSH HWRTWAACFI QAAWRRYKRR VMENNLTAIE SMENEEGEVG 660
  661 EELVVVEEEE CVEESPRTKM NLGVMVLASR FAANTRRGVA AQRVKDVELP RFKKPEEPDF 720
  721 SAEHDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle