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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7269521, gi|4...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNANACKDNP TMRGLLRASS LLLCGVILIQ LLAAQIHAQS KKPKSPWPTL TGDPPLVIAR  60
   61 GGFSGLFPDS SYDAYNFAIL TSVPDAVLWC DVQLTKDALG ICFPDLTMRN SSSIEAVYPT 120
  121 RQKSYPVNGV PTSGWFTIDF SLKDLKDVNL IRGILSRSEK FDGNSNPIMT VQSVSTQMKP 180
  181 SFFWLNVQHD AFYAQHNLSM SSFLVAASKT VLIDFISSPE VNFFKKIAGR FGRNGPSLVF 240
  241 RFLGQDEFEP TTNRTYGSIL SNLTFVKTFA SGILVPKSYI LPLDDQQYLL PHTSLVQDAH 300
  301 KAGLEVFVSG FANDIDIAHD YSFDPVSEYL SFVDNGNFSV DGVLSDFPIT ASASLDCFSH 360
  361 VGRNATKQVD FLVITKDGAS GDYPGCTDLA YKKAIKDGAD VIDCSVQLSS DGTPFCLSSI 420
  421 DLGNSTTVSL TAFRNRSTTV PELGSLGAIY TFSLTWAEIQ TLTPAISNPY RVTSLFRNPK 480
  481 QKNAGKLFSL SDFLSLAKNS TSLSGVLISV ENAAYLREEQ GLDVVKAVLD TLTQTGYSNS 540
  541 TATKVMIQST NSSVLVDFKK QSQYETVYKV EENIRDILDS AIEDIKKFAD AVVIQKLSVF 600
  601 PVAQSFITTQ TNVVEKLQKS QLPVYVELFQ NEFLSQPYDF FADATVEINS YITGAGINGT 660
  661 ITEFPFTAAR YKRNLCLGRK ETIPYMAPAQ PGALLTLVSP TAFPPAEAPN PVFTDADVTE 720
  721 PPLPPVTAKA PTSSPGTPST NAQAPSGQTR ITLSLLLSVF AMVLASLLLL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle