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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20977030
Protein type: Transmembrane
Type Confidence: 0.57
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLXQCPXT SIGPPTIASM GWLIAHSYPF SRPLLTSMTV NGPLGSTSIS INSNLASTLL  60
   61 LEVRQGTLAV LPLTSMAVNG PRWLPSTSPL TSMGRGNDAI GRSIDVNGRY ACLWEVYISN 120
  121 ARLGNRHSAW GRRSKLDLGD TIEYKLLVLF AGSHRFEFGT RSFSAGVLDA GYARLKMMDP 180
  181 LDNGLFDLPD YEHTEDENFP PLPPPHSPGA DDEADDVANG DDWTENAGQT QREEAPKPAR 240
  241 RVVKRPQPKL DGQRLASQRG LPALRHMFDD VKFKGKGHET EDLKILLRQM ENWAHRLFPK 300
  301 LQFEDFLNRL ESMGNKKEVQ TCLKKIRMDL PIVHDDFLSE EVVVQTEDHA IDMPSEDSLF 360
  361 PTSSMFLXQS QPVKVDLSEE TLQRIERNRR LALERRMEKM QAQAESQALS QATQSDPNEI 420
  421 PDDAEMLDAV ESMTGIPTAS QSPPHVDKDL SLVLHSHDLP VQDVSQSPAP CPKPQGDAPS 480
  481 EKALSLVHSA LPSTSDPTSP RKPLTEQLPD DADADTSSAT PHTEAPACAN TKEEYECNRS 540
  541 SLCCFCYPIN HFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle