YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27754310, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSLVESGWK YLVTHFSDFQ LACIGSFILH ESVFFLSGLP YIFLERTGFL SNYKIQTKSN  60
   61 TPEAQGKCIA RLLLYHCCVN LPLMMASYPV FRFMGMESSF PLPSWKVVSA QILFYFIIED 120
  121 FVFYWGHRIL HTKWLYKNVH SVHHEYATPF GLTSEYAHPA EILFLGFATI VGPALTGPHL 180
  181 ITLWLWMMLR VIETVEAHCG YHFPWSPSNF LPLYGGADFH DYHHRLLYTK SGNYSSTFVY 240
  241 MDWIFGTDKG YRKLKALKET

Type	Start	End	Confidence
Cytoplasmic	1	20	0.53
Transmembrane Helix	21	43	0.75
Non-Cytoplasmic	44	71	0.48
Transmembrane Helix	72	91	0.82
Cytoplasmic	92	103	0.47
Transmembrane Helix	104	126	0.70
Non-Cytoplasmic	127	161	0.68
Transmembrane Helix	162	183	0.89
Cytoplasmic	184	260	0.74