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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19913128
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMASLSDVEN SITTSTLPYS YAPLPNGEQP AGNDRPVHSS RKTALFLVSV FLAVASLVAL  60
   61 FAGNGPVLPK NLNTSAVPST AGMPEKVAPL SRGVEKGVSE KSFHPLLGAD NSFPWSNNML 120
  121 DWQRTAFHFQ PKKNWMNDPN GPVFYNGWYH LFYQYHPDAP VWGKIVWGHA VSKDLINWRH 180
  181 LPIAMETDEW YDEQGVWTGS ATILPNGELV VLYTGSTNES VQVQNLAYPA DPSDPLLIKW 240
  241 VKYPGNPVLV PPPGIDNKDF RDPTTAWKTP EGKWRITIGS KINKTGISLV YDTEDFKTFE 300
  301 LLDGLLHAVP GTGMWECVDF YPISKQGENG LDTSVDGPGV KHVVKASMDD DRNDYYAIGT 360
  361 YDAYKGKWTP DNPTLDVGIG LRYDYGIYYA SKTFYDQNKQ RRVLWSWIKE TDTEASDIKK 420
  421 GWASLMGVPR TIVLDKKTQS NIIQWPVEEI NLLRTNLTVF KTVVVESGSL VPLNLPSASQ 480
  481 LDIVAEFEVD KKTVERLNGA DIAYDCAKNG GAAQRGALGP FGFSVLAHEG LAEHTPVYFY 540
  541 VAKGVDGNLQ TFFCADQSRS SNANDVDKSI YGSIVPVLKG EKLAMRILVD HSIVESFAQE 600
  601 GRTCITSRVY PTKAINNNAQ LFLFNNATAT KVTASVNVWQ MNSAHV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle