YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53134979
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGALARKAA DYVRSKEFRD YLMSTHFWGP VANWGLPVAA INDMKKSPEI ISGRMTFALC  60
   61 CYSLTFMRFA YKVQPRNWLL FACHLTNEVA QLIQGGRLIK YRLEKKN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.80
Transmembrane Helix	21	41	0.60
Non-Cytoplasmic	42	49	0.70
Transmembrane Helix	50	71	0.77
Cytoplasmic	72	107	0.61