YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13560254
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFASVILAT FAGVACAFAP STPAFSRSSA LYSAVEDEVT TGPVAAGSID RSLSGTDSSL  60
   61 SYDAFDPTSG DSPALKRNNA DEVWVSQRAR PRRNRKSAAV RGMVRENIVT PANFIYPLFI 120
  121 HEEDFNTEIP SMPGCERHSL PNMLKEVGEA YDLGVKTFVL FPKVPDELKT NLGVEAYNPD 180
  181 GIVHRAIRMI KEAYPDSVVC TDVALDPYSD QGHDGVVEDG KILNDVTINQ LCKQAVSQAR 240
  241 AGADVVAPSD MMDGRVGAIR DALDAEGFTD VSILAYTAKY ASAYYGPFRD ALDSHPGFGD 300
  301 KKTYQQDPAN GREALIEAAL DAAEGADMLM VKPGMPYLDI IRRLKDATPL PVAAYHVSGE 360
  361 YAMIKAACEK GWLEEKDVVL ETLTCFKRAG ADIILTYYAK QAAQWIKDDG LY

Type	Start	End	Confidence
Signal Peptide	1	26	0.97
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	412	0.99