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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14275754
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLTTNQMSAV RLVAIGRWPD TLRNFKVDGT TYDPSDGKIH DWPTLNMDDN LQMIAKIAAL  60
   61 CNDASIAHSE HQYVATGMPT EAALKVLVEK MGLPGGYTPS LDSSDLLRCC QWWNNDAKRV 120
  121 GTLEFDRTRK SMGVIVKKAE TGKNLLLVKG AVENLLERSA YIQLLDGSVV LLDEGAKALV 180
  181 LSTLREMSGS ALRCLGFAYK EDLADFATYD GEEHPAHKYL LDPAYYSSIE SNLIFCGFVG 240
  241 LRDPPREEVH KAIEDCRAAG IRVMVITGDN KETAEAICRE IGVFGPSENI SSKSFAGKEF 300
  301 MALPDKKKLL RQTGGLLFSR AEPKHKQEIV RLLKEDGEVV AMTGDGVNDA PALKLADIGI 360
  361 AMGITGTEVA KEASDMVLAD DNFSTIVSAV GEGRSIYNNM KAFIRYMISS NIGEVPSIFL 420
  421 TSAFGIPEGL IPVQLLWVNL VTDGPPATAL GFNPPDKDIM KKPPRRSDDS LITPWILFRY 480
  481 MVIGLYVGIA TVGIFIIWYT HGSFLGIDLA SDGHTLVSYS QLSNWGQCPS WEGFNVSSFT 540
  541 AGARTFNFDE NPCDYFQGGK IKATTLSLSV LVSIEMFNSL NALSEDGSLL SMPPWVNPWL 600
  601 LLAMSVSFGL HFLILYVPFL TQIFGIVPLS FNEWLLVVAV AFPVVLIDEV LKFVGRCLTA 660
  661 RARKQLGKRK EE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle