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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACBD5_CHICK
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETGSVHAT RFEAAVKVIQ SLPKNGSFQP TNEMMLKFYS FYKQATQGPC NIPRPGFWDP  60
   61 IGRYKWDAWS ALGDMSKEEA MIAYVEEMKK ILESMPMTDK VEELLQVIGP FYEIVEDKKN 120
  121 RGSGLTSDLS NVMNSTPNIK AVNGKAESSD SGAESEEEGL REEEEKELQQ NVKDCKSPKT 180
  181 ESLAAKDLEN SVANDCYKDS FIPDMQNGIQ TKSALNGLNV EEEIKKTEPS LEIANNCDHR 240
  241 GANEENTEEV SGTQHLTSDS DSEVYCDSME QLGLEEPLEI ITSAKGSLKR SSHFLDVDHR 300
  301 LQLENTDLPR HACTTAGNLQ LGTAVDGAVQ EKGEVKCGGE DGKASNGAPH KEKKDGEKAD 360
  361 FYGVRRGRGH RLHPVGDGSQ GGQMGNGGDG ERWGSDRGPR GSLNEQIAVV LMRLQEDMQN 420
  421 VLQRLHMLEA VTASQARSAT LQSNYQPASS VKKPSWWPFE ISPGVLAFAI VWPFIAQWLV 480
  481 HVYLQRKRRK LN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle