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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPN1_CHICK
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEELCAALAG GVALAAPNSP AAPHPRLSAY KGRGDRLGQA ERRRRLLCLQ RERRLDYVNH  60
   61 ARRLAEGDWA GVESDEDGGE DGDGEEEMEV DAGRRLPKRY ANQLMLSEWL VDVPVDLEQE 120
  121 WIVVVCPVGK RALVVASRGS TAAYTKSGFC VNRFPSLLPG GNRHNTMNEK VYCILDCIYN 180
  181 EAEQTYYILD VMCWRGHPVY DCQTDFRFFW LSSKIQEEEG LGEKSRINPY KFVGLQNFPC 240
  241 TSESLCEVLT TNFPFEVDGL LFYHKQTHYT PGSTPLVGWL RPYMVPDILG LTVPATPLTA 300
  301 KPDYAGRQLQ QIIESKRSKK LAAGKAQPSA EAAARNGHYE LEHLSTPQPA NSAQGQEEAG 360
  361 SQMEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle