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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|322659
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDVRIYHHS FLLVFVVVIL FHPALSIYFN ILSSTATLTI SSNRTLVSPG DVFELGFFKT  60
   61 TSSSRWYLGI WYKKLYFGSI KNYVWVANRD SPLFNAIGTL KISNMNLVLL DQSNKSVWST 120
  121 NLTRGNERSP VVAELLANGN FVMRDSNNKD ASGFLWQSFD YPTDTLLPEM KLGYDHKTGL 180
  181 NRFLTSWRSS DDPSSGEISY KLDTQSGMPE FYLLINGSPD HRSGPWNGVQ FSGIPEDQKL 240
  241 SYMVYNFIEN TEEVAYTFRM TNNSIYSRLT ISSKGILERW TWTPTSFSWN LFWSLPVDLK 300
  301 CDLYMACGAY SYCDVNTSPE CNCMQGFMPF NMQQWALRDG SGGCIRRTRL SCSSDGFTRM 360
  361 KKMKLPETRM AIVDPSIGLK ECRKRCLSDC NCTAFANADI RNGGTGCVIW TGELEDIMTY 420
  421 FAADLGQDIY VRLAAADIVK KRNADGKIIT LIVGVSVLLL MIMFCLWKRK QKRAKAMATT 480
  481 IVNRQRNQNL LMKLMTQSNK RQLSRENKTE EFELPFIELE AVVKATENFS NCNELGQGGF 540
  541 GIVYKGMLDG QEVAVKRLSK TSLQGIDEFM NEVRLIARLQ HINLVRILGC CIEADEKILI 600
  601 YEYLENSSLD YFLFGKKRSS NLNWKDRFAI INGVARGLLY LHQDSRFRII HRDMKPSNIL 660
  661 LDKYMIPKIS DFGMARIFAR DETEANTENA VGTYGYMSPE YAMDGVISEK TDVFSFGVIV 720
  721 LEIVSGKRNR GFYQLNPENN LLSYAWSHWA EGRALEIVDP VIVDSFSSLP STFQPKEVLK 780
  781 CIQIGLLCIQ ERAEDRPTMS SVVWMLGSEA TDIPQPKPPI YCLITSYYAN NPSSSRQFED 840
  841 DESWTVNKYT CSVIDAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle