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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13016808
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGISLEEIK NENVDLERIP VEEVFEQLKC SKEGLSSDEG ANRLQVFGPN KLEEKKESKF  60
   61 LKFLGFMWNP LSWVMEAAAI MAIALANGSG RPPDWQDFVG IISLLVINST ISFIEENNAG 120
  121 NAAAALMAGL APKTRVLRDG RWSEEDTAIL VPGDIISIKL GDIIPADARL LEGDALSVDQ 180
  181 SALTGESLPA TKNPSDESFS GSTVKKGEIE AVVIATGVHT FFGKAAHLVD NTNQVGHFQK 240
  241 VLTAIGNFCI CSIALGILIE LVVMYPIQHR KYRDGIDNLL VLLIGGIPIA MPTVLSVTMA 300
  301 IGSHRLSQQG AITKRMTAIE EMAGMDVLCS DKTGTLTLNK LSVDKNLIEV FAKNVEKDYV 360
  361 ILLAARASRT ENQDAIDAAI VGMLANPKEA RAGVREIHFF PFNPVDKRTA LTYIDSDGNW 420
  421 HRSSKGAPEQ ILNLCNCKED VRKKAHSVID KFAERGLRSL GVARQEVPEK NKDSPGAPWQ 480
  481 FVGLLPLFDP PRHDSAETIT RALNLGVNVK MITGDQLAIA KETGRRLGMG TNMYPSSSLL 540
  541 GQSKDAAVAA LPVDELIEKA DGFAGVFPEH KYEIVKRLQE RKHICGMTGD GVNDAPALKR 600
  601 ADIGIAVADA TDAARGASDI VLTEPGLSVI ISAVLTSRAI FQRMKNYTIY AVSITIRIVF 660
  661 GFMFIALIWK FDFAPFMVLI IAILNDGTIM TISKDRVKPS PLPDSWKLKE IFATGVVLGS 720
  721 YMALMTVVFF WLMKDTDFFS DKFGVRSIRK NPDEMMAALY LQVSIISQAL IFVTRSRSWS 780
  781 FLERPGLLLL GAFMIAQLVA TFIAVYANWG FARIKGMGWG WAGVIWVYSL VTYFPLDILK 840
  841 FVIRYVLSGK AWDNLLENKT AFTTKKDYGK EEREAQWATA QRTLHGLQSP ETTNLFNDKN 900
  901 SYRELSEIAE QAKRRAEVAR LRELHTLKGH VESVVKLKGL DIDTMQQHYT V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle