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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4809179
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFRKVVRNP TVQNIQIYRK TLGHQIRDII EKLTKKIDPF VKFIFPNFIA FHYFYIIAFA  60
   61 LLCSILIYPV KNFAYIDILF LATGAATQGG LNTVDLNELS LYQQIVLYIT TALTTPIFIH 120
  121 SGLAFVRFYW FERYFDGIRD WSKRDFEMRR TMTLRQRELT KNNTMENASR STGQGPLNFL 180
  181 TRTFTHGDRD ASNFQGRLFR GEVVKRDEDN NDDSSVDTRP PEAHSDHTEK FIGRRKSRDI 240
  241 NPADMYRSIA MLQNRHESND NIKGPALVIK SPAEREKEIE EQRRLQKERE EQQGQSIQFK 300
  301 VEPRPTKSTR STFEPSGIRK SFTRRKRPSF FKGSQSARII RDKLRRRSKG SDVNNVDDEE 360
  361 EEQDGHDADM EGSSEDDSVI ESSDGQSESI SAPNFDHHSS EPTLQSGGTV SAPSSLESNE 420
  421 IEEEDEELSD LPTGVSYYGL HSGGDPRNRL NRVMSTNYLS YEPKIGRNST FVGLSESQKV 480
  481 ELGGVEYRST KVLCLLLSIY YLGFSILAMI IFAAWIQPMN NYKEIVRSQG VSPTWWGFWT 540
  541 GMSAFGNLGL TLTPNSMISF HKSIYTLIWM MWFIVIGNTG FPIFLRFVIW ILFKLSPDLS 600
  601 LRKDSLGFLL DHPRRCFTML FPKAATWWLF LILIGMNAID LILFIILDLN TDVVKDLTAG 660
  661 FKVLNGLFQA VSTRTAGFAV LDLSQLHPSV QVSYMLMMYV SVMPLAISIR RTNVYEEQSL 720
  721 GVYGEWEKNQ EDDGSEKNTK SFIGAHLRRQ LSFDLWYMFL GLFIICICEG GKIQDPSKPS 780
  781 FTVFQCLFEV VSAYGTVGLS LGYPGSNQSF SGQFTTISKL VIIAMLIRGR HRGLPYTLDR 840
  841 AIILPSAKLK ENDLLHELTH SRRPTTLGLN GSTSHDNRTT SVADSTSSIG NKHIDRFRDR 900
  901 SRSVWHGLTS AFSMGHQPRP HRTMTSRSLD DTITTDRMMS TQSNQSFNNE SQQQTFSDGN 960
  961 NYPMHSMNSN HHYDNRSMTP NQYHVFRDSF DLRSGITEHK GLDGVHANTV EAFDHSNYNS1020
 1021 NSNSNSNSNS NSKNTETSSS GPIFNHINSS TSLHSPHSTG SMQSLNSSPR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle