YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7488883
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METSRKGQWL SVLICVVLLL KAEGVPVGIT FVENAVAKGA VCLDGSPPAY HFHKGSGAGI  60
   61 NNWIVHFEGG GWCNNVTSCL SRRDTRLGSS KKMDTQLSFS GFFSNSKKFN PDFYDWNRIK 120
  121 VRYCDGSSFT GDVEAVDPAT NLHFRGSRVF AAVVDDLLAK GMKNAQNAII SGCSAGGLAA 180
  181 ILNCDRFKSL LPRTTKVKCL ADAGYFINVK DVSGAQRIEE FYSQVVQTHG SAKNLPASCT 240
  241 SRLRPGLCFF PQNVVSQIST PIFFVNAAYD SWQIKNILAP GAADPHGTWR ECKLDIKKCS 300
  301 SNQLSAMQVF RTDFLRAFGA VGNSPSKGHF IDGCYAHCQT GTQETWLRND SPVLGSTTIA 360
  361 KAVGDWYYDR KPFKQIDCAY PCNPTCHNRI FDQNERPDV

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	399	0.99