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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2129544, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DALLPISARE EEPLCPYTRL PMADPNQETH GPRRRRPFKG LLAVSFGLLF IAFYVALIAT  60
   61 HDGSRSNDEG IDETETITSR ARLAGVSEKR NDGLWKLSGD RNTPAFEWNN SMLSWQRTAF 120
  121 HFQPEQNWMN DPNGPLFYKG WYHFFYQYNP NAAVWGDIVW GHAVSRDLIH WVHLPIAMVA 180
  181 DQWYDSNGVW TGSATFLPDG SIVMLYTGST DKAVQVQNLA YPEDPNDPLL LKWVKFPGNP 240
  241 VLVPPPGILP KDFRDPTTAW KTSEGKWRIT IGSKLNKTGI SLVYDTIDFK TYEKLDTLLH 300
  301 RVPNTGMWEC VDFYPVSKTA GNGLDTSVNG PDVKHIVKAS MDDTRFDHYA VGTYFDSNGT 360
  361 WIPDDPTIDV GMTASLRYDY GKFYASKSFY DQNKGRRVLW SWIGESDSEA SDVQKGWSSL 420
  421 QGIPRTVVLD TKTGKNLVQW PVEEIKSLRL SSKQFDLEVG PGSVVPVDVG SAAQLDIEAE 480
  481 FEINKESLDK IIGNASVVAE AEEFSCEKSG GSTVRGALGP FGFSVLATES LSEQTPVYFY 540
  541 VAKGKDSELK TFFCTDTSRS SVANDVVKPI YGSVVPVLKG EKLTMRILVD HSIVEAFGQG 600
  601 GRTCITSRVY PTTAIYGAAK LFLFNNALDA TVTASFTVWQ MNSAFIHPYS DEAVRALSRT 660
  661 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle