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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28564137
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQRISYSLH RRFLSGLLRA KHYPLRRVLL PLVLLQIIII AFVWSNSSQR IAADPDIGYL  60
   61 QSNDNDDSSW YGRMASSFAL KNNREIQIAK KLYENLKFST QPRWASEYTL QNDLLMVKVG 120
  121 PQKGTKLSSV EDLKFYDFDP RLTWSVVLNH LENENENENE HGKLPFSWYD WTSFHELNKL 180
  181 ISIDKTVLPC NFLFQSAFDK ESLDSIEQEL SEPLFLYERP KYAQKLWYRA ARNLDRIKDT 240
  241 KELDKHCSKL FTPKGNGSPK DLKFNTQFQI KELYDKVRPE VYQLQARNYI LTTQSHPLTI 300
  301 SIIESDNATY QVPLQTDKSK NLVQSGLLQK YISDNVNSTN KRKKKQNQDV EFNHNTLFQK 360
  361 FVSDEQVNSR YKLDIEETDK STFDKDLVYL SPSDFRFDAS KKIKELESLK EAHPNQFSPH 420
  421 NENYLNSLKH SISTHPALQK KFFYEAGGVK QYKGMGFHRD KRFFNGDTLI NDKQEYQARL 480
  481 NSMIRTFQKL TKANGLISWL SHGTLYGYLY NGLAFPWDND FDLQMPIKHL QLLSQYFNQS 540
  541 LILEDPREGN GRYFLDVSNS LTVRINGNGK NNIDARFIDV DTGLYIDITG LASTSTPSRD 600
  601 YLNSYIEERL KEEKLDINHI PESDGETADV PKKLDGGLVN LAVLNITELN DYIASEENKK 660
  661 LKRVPTDTNL KDIMKKELED LPNSKTIENK LNPKQRYFIN DKLRLYNCRN NHFNSFEELS 720
  721 PLIHTVFHGV PALIPHRHTY CLHNE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle