YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|162462697, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTESLGLKL FRMYAHLVGF FRYYKSLPPI SKAYGTLCFF TTVLVQLQIL HPLFLYLDYP  60
   61 LVFKKFEIWR LLTSFFFLAP FSMKFGIRLL MIARYGVMLE KGAFDKRTAD FLWMMIFGAI 120
  121 SLLVLSVIPQ LNTYVLGLPM VSMLVYVWSR ENPNAQINIY GILQLKAFYL PWVMLLLDVI 180
  181 FGSPLMPGLL GIMVGHLYYY FAVLDPLATG KSYLKTPKWV HKIVARFRIG MQANSPVRPP 240
  241 ANGNSGSGVF RGRSYRLNQ

Type	Start	End	Confidence
Cytoplasmic	1	32	0.89
Transmembrane Helix	33	51	0.92
Non-Cytoplasmic	52	70	0.79
Transmembrane Helix	71	92	0.88
Cytoplasmic	93	110	0.89
Transmembrane Helix	111	131	0.92
Non-Cytoplasmic	132	173	0.67
Transmembrane Helix	174	201	0.75
Cytoplasmic	202	259	0.82