YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BG5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYLPKKLFL FFFSCIVVIV NYNNSDFVNA ANSIGFVNAA NSIGLNYGLL GDNLPSPSKV  60
   61 ITLYKSIDIT KIRIFDPNTE VLNALRGHRD IAVTVGVRDQ DLAALSASEE AVKGWFATNI 120
  121 EPYLSDINIA FITVGNEVIP GPIGPQVLPV MQSLTNLVKS RNLPISISTV VAMWNLEQSY 180
  181 PPSAGMFTSQ AREQLVPVLK LLSQTNSPIL VKIYPYFSYA SDPSSIRLDY ATFNTEAIVV 240
  241 QDGSLGYSNM FDAIFDAFVW AMEKEGVKDL PMVVSETGWP SAGNGNITTP DIAGTYNRNF 300
  301 VKHIASGKGT PKRPNKGIDG FLFATFNENQ KPVGTEQNFG LYNPNDMKPI YNLF

Type	Start	End	Confidence
Signal Peptide	1	30	0.87
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	354	0.99