YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BG4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYSPKKLFL FFLSCIVLYV NSNNSGFVTA ANSIGLNYGL LGDNLPSPSN VINLYKSIGI  60
   61 SRIRIFDPNT EVLNALRGHR DIEVTVGVKD QDLAALAASE EAVKGWFAAN IESYLADVNI 120
  121 TFITVGNEVI PGPIGPQVLP VMQSLTNLVK SRNLPISIST VVAMSNLEQS YPPSAGMFTS 180
  181 QAREQLVPVL KLLSQTSTPI LVNIYPYFAY ASDPANIRLD YASFNTKSIV VQDGSLGYSN 240
  241 MFDAIFDAFV WAMEKEGVKN LPMVVSETGW PSAGNGNFTT PAIASTYNRN FVKHIASGKG 300
  301 TPKRPNKSMN GFLFATFNEN QKPAGTEQNF GLYNPSDMKP IYKLF

Type	Start	End	Confidence
Signal Peptide	1	30	0.90
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	345	0.99