YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KPRS2_SPIOL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPAPRSLS SSSSSSSSSF CPSISPPPRS PSRASLPFSV KCNTVEPLKL VNGKPSVPIL  60
   61 DEQSLPKFLH SKRLESSVNR SNTRLKLFSG LANPALAKEV AWYMGLELGK VKIKRFADGE 120
  121 IYVQLEESVR GCDVFIIQPT SPPANENLME LLIMIDACRR ASAKNITAVI PYFGYARADR 180
  181 KTQGRESIAA KLVANLITEA GANRVLACDL HSGQSMGYFD IPVDHVYCQP VILDYLASKG 240
  241 IASSDLVVVS PDVGGVARAR AFAKKLSDAP LAIVDKRRHA HNVAEVMNLI GDVKGKVAVM 300
  301 LDDMIDTAGT ITKGAELLHE EGAREVYACC THAVFSPPAI ERLSSGCFQE VIITNTLPVA 360
  361 EKNFFRQLTV LSTANLLGET IWRVHDDSSV SSIFQ

Type	Start	End	Confidence
Signal Peptide	1	34	0.92
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	395	0.99