YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6634501
Protein type:	Globular with Signal Peptide
Type Confidence:	0.33
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMASRGEGV KLASSMMLFS RSFSTAISRG IIAKEAVTAK AVECHGDVVR KNIGEFWVRG  60
   61 SVFGVRHGST MSFGEKDQQK VEMKQTQSVA EGGDKEEKKE IASYWGVPPS RVTKEDGAEW 120
  121 KWNCFRPWET YSADLSIDLK KHHVPATFLD KMAYWMVKAL RFPTDLFFQR RYGCRAMMLE 180
  181 TVAAVPGMVG GMLLHCKSLR RFEHSGGWIK TLLDEAENER MHLMTFMEVA KPRWYERALV 240
  241 ITVQGVFLNA YFLGYIISPK FAHRMVGYLE EEAIHSYTEF LKELDKGNIE NVPAPAIAVD 300
  301 YWRLPPDATL RDVVLVVRAD EAHHRDVNHF ASDIHYQGRE LKEAPAPIGY H

Type	Start	End	Confidence
Signal Peptide	1	26	0.55
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	351	0.72