YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28557617
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELGGAGPVS VSSSASSTPA TAAGGGGGPS SSSSSSSSAA SAYQQQQQQL SFGQNMDSQS  60
   61 SVLSVGSSIP NTGTPPPGYM SEDGDPIDPN DNMNMSRLTP PADAAPVMYH EPAFWCSISY 120
  121 YELNTRVGET FHASQPSITV DGFTDPSNSE RFCLGLLSNV NRNEVVEQTR RHIGKGVRLY 180
  181 YIGGEVFAEC LSDSSIFVQS PNCNQRYGWH PATVCKIPPG CNLKIFNNQE FAALLSQSVS 240
  241 QGFEAVYQLT RMCTIRMSFV KGWGAEYRRQ TVTSTPCWIE LHLNGPLQWL DRVLTQMGSP 300
  301 RLPCSSMS

Type	Start	End	Confidence
Signal Peptide	1	22	0.92
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	308	0.99