YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28557579
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKKIGEYY APPVKMGKWE GFKKFLWNSE TSQCLGRTGS SWAKILLFYI IFYAALTGFF  60
   61 AAIFTVFYQT LDNEKPKWML DNGLIGSNPG LGFRPMPPEA NVESTLVWYE SSKKDNYKYW 120
  121 VDETSRFLKS YQELEKQNQV NCSFEHPPQD DKVCGIDFSS FSPCTADNNF GYHVARPCIF 180
  181 LKLNKIYNWI PEIYNDSKTL PDHMPEELKQ HIKEKQSLRP NETNVVWVSC EGENPADVEN 240
  241 IKARDYYPRM GFPRYYFPFK NIQGYIPPIV AVQFTVETGV LINIECKAWA RNINHDRSDR 300
  301 RGSVHFELMV D

Type	Start	End	Confidence
Cytoplasmic	1	44	0.91
Transmembrane Helix	45	68	0.91
Non-Cytoplasmic	69	311	0.91