YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21912927
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACSASSTAL LSSNPKAASI SPKSSFQAPI SQCLSVPSSF NGLRNCKPFV SRVARSLSTR  60
   61 VAQSQRRRFV VRASSELPLV GNQAPDFEAE AVFDQEFIKV KLSEYIGKKY VILFFYPLDF 120
  121 TFVCPTEITA FSDRYGEFEK LNTEILGVSV DSVFSHLAWV QTDRKSGGLG DLNYPLISDV 180
  181 TKSISKSYNV LIPDQGIALR GLFIIDKEGV IQHSTINNLG IGRSVDETLR TLQALQYVQD 240
  241 NPDEVCPAGW KPGEKSMKPD PKGSKEYFAS I

Type	Start	End	Confidence
Signal Peptide	1	18	0.82
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	271	0.99