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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4160292
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNLKFWFLL AILSVFLCKS SAVESDAIES VLRRLHSKEA PPIVQESAAK GVLQRLLPAH  60
   61 LHSFEFKIVS KDLCGGRSCF RITNYKVSSR NSPEILIQGT TAVEITSGLH WYLKYRCGAH 120
  121 ISWDKTGGVQ LASVPKPGSL PLVKQMELTI QRPVPWNYYQ NVVTSSYSFV WWDWQRWEKE 180
  181 IDWMTLPGIN LPLAFTGQEA IWQKVFLDYN ITTQDLNDFF GGPAFLAWAR MGNLHAWGGP 240
  241 LSQNWLNIQL ALQKQILSRM RELGMTPVLP SFSGNVPAAL KKIFPSANIT RLGDWNTVNG 300
  301 DPRWCCTFLL APSDPLFIEI GEAFIRKQIE EYGDITDIYN CDTFNENTPP TDDPTYIHLS 360
  361 ALLCTKQCQK QITMRCWLNA RVWLFYSDSK YWKSPQMEAL LHSVPRGKMI VLDLFADVKP 420
  421 IWKSSSQFYG TPYIWCMLHN FGGNIEMYGV LDAVASGPID ARTSENSTMV GVGMCMEGIE 480
  481 HNPVVYELMS EMAFREDNFQ LQGWLKSYSH RRYGKVNDQI QAAWDILYHT IYNCTDGIAD 540
  541 HNKDYIVEFP DWDPSGKTGT DISGTDSSSQ NRMQKLAGFQ WNRRFLFFEK SSSLPKPRLW 600
  601 YSTEDVFQAL QLFIDALKKL SGSLTYRYDL VDLSRQSLSK LANQVYLDAI SAFRREDAKP 660
  661 LNQHSPKFLP LLQDIDRLLA ADDNFLLGTW LENCPQNLAM NSDEKKQYEW NARTQITMWF 720
  721 DNTKYNQSQL HDYANKFWSG LLEAYYLPRA SIYFELLSKS LKEKVDFKLE EWRKEWIAYS 780
  781 NKWQESTELY PVKAQGDALA IATALFEKYF S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle