YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1167854
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYLRSSFVF FLLAFVTCTY AATIEVRNNC PYTVWAASTP IGGGRRLDRG QTWVINAPRG  60
   61 TKMARIWGRT NCNFNAAGRG TCQTGDCGGV LQCTGWGKPP NTLAEYALDQ FSGLDFWDIS 120
  121 LVDGFNIPMT FAPTNPSGGK CHAIHCTANI NGECPRELRV PGGCNNPCTT FGGQQYCCTQ 180
  181 GPCGPTFFSK FFKQRCPDAY SYPQDDPTST FTCPGGSTNY KVIFCPNGQA HPNFPLEMPG 240
  241 SDEVAK

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	246	0.99