YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20502881
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTASINGWC LTSSSSTTTT SSFSARRRPT LRPSVVASLN SSPSPPTLIQ DRPVFAAPIP  60
   61 LLTPREEMGN KSYDEAIEAL KKLLSEKGEL KAEAAARVDQ ITAELNTASA DGKPSDSSVE 120
  121 RLKEGFVYFK KEKYEKNPAL YGELAKGQSP KYMIVACSDS RVCPSHVLDM QPGEAFVVRN 180
  181 VANMVPPYDQ IKYAGIGSAI EYAVLHLKVQ EIVVIGHSAC GGIKGLMSFP FDGNNSTDFI 240
  241 EDWVKIGIPA KTKVLAEHGG EPLGVQCTHC EKEAVNVSLG NLLSYPFVRD GLVKKTLGIK 300
  301 GGYYDFVKGS FELWSLQFQL SSSLSV

Type	Start	End	Confidence
Signal Peptide	1	24	0.89
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	326	0.99