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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7434412
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGVRNIYHH SYTSILLVFV VMILFHPAFS IYINTLSSAD SLTISSNRTL VSPGNIFELG  60
   61 FFRTTSSSRW YLGMWYKKLS DRTYVWVANR DNPLSNSIGT LKISGNNLVI LGDSNKSVWS 120
  121 TNITRGNERS PVVAELLANG NFVMRDSNNN DGSGFLWQSF DYPTDTLLPE MKLGYDLITG 180
  181 LNRFLTSSRS LDDPSSGDYS YKFESRRLPE FYLLKGSGFR VHRSGPWNGV QFSGMPEDQK 240
  241 LSYMVYNFTQ NSEEVVYTFR MTNNSIYSRL TISSEGYLER LTWTPSSGMW NVFWSSPVDL 300
  301 QCDVYKICGP YSYCDVNTSP VCNCIQGFNP LNVHQWDLRD GTSGCIRRTR LSCSGDGFTR 360
  361 MKNKKLPETT MAIVDHSIGL KECKKWCLSD CNCTAFANTD IRNGGTGCVI WTERLEDIRT 420
  421 YFTDGQDLYV RLAAADLVKK RNANGKIASL IVGASVLLLL IMFCLWKRKQ NRVKASAISI 480
  481 ANRQRNKNLP MNGMVLSSKK QLRRGNKTEE LELPLIELEA VVKATENFSN CNKLGEGGFG 540
  541 IVYKGRLLDG QEIAVKRLSK TSVQGTDEFM NEVTLIARLQ HINLVQIFGC CIQADEKMLI 600
  601 YEYLENSSLD SYLFGKTRSS KLNWKERFEI TNGVARGLLY LHQDSRFRII HRDLKVSNIL 660
  661 LDKNMIPKIS DFGMARIFAR EETEANTMKV VGTYGYMSPE YAMHGIFSEK SDVFSFGVIV 720
  721 LEIVTGKRNR VFYNLNYEDN LLNYAWNNWK EGRALEIVDP AILDSLSSLP STFQPQDVLK 780
  781 CIQIGLLCVQ DLAENRPTMS SVVWMLGSEA TEIPQPKPPG YCLVRSPYEP DPSSNRQRED 840
  841 DESWTVNQYT CSVIDAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle